April 13, 2021

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Principles of Biomedical Informatics

Principles of Biomedical Informatics
Author : Ira J. Kalet, PhD
Publisher : Academic Press
Release Date : 2013-09-26
Category : Computers
Total pages :708
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This second edition of a pioneering technical work in biomedical informatics provides a very readable treatment of the deep computational ideas at the foundation of the field. Principles of Biomedical Informatics, 2nd Edition is radically reorganized to make it especially useable as a textbook for courses that move beyond the standard introductory material. It includes exercises at the end of each chapter, ideas for student projects, and a number of new topics, such as: • tree structured data, interval trees, and time-oriented medical data and their use • On Line Application Processing (OLAP), an old database idea that is only recently coming of age and finding surprising importance in biomedical informatics • a discussion of nursing knowledge and an example of encoding nursing advice in a rule-based system • X-ray physics and algorithms for cross-sectional medical image reconstruction, recognizing that this area was one of the most central to the origin of biomedical computing • an introduction to Markov processes, and • an outline of the elements of a hospital IT security program, focusing on fundamental ideas rather than specifics of system vulnerabilities or specific technologies. It is simultaneously a unified description of the core research concept areas of biomedical data and knowledge representation, biomedical information access, biomedical decision-making, and information and technology use in biomedical contexts, and a pre-eminent teaching reference for the growing number of healthcare and computing professionals embracing computation in health-related fields. As in the first edition, it includes many worked example programs in Common LISP, the most powerful and accessible modern language for advanced biomedical concept representation and manipulation. The text also includes humor, history, and anecdotal material to balance the mathematically and computationally intensive development in many of the topic areas. The emphasis, as in the first edition, is on ideas and methods that are likely to be of lasting value, not just the popular topics of the day. Ira Kalet is Professor Emeritus of Radiation Oncology, and of Biomedical Informatics and Medical Education, at the University of Washington. Until retiring in 2011 he was also an Adjunct Professor in Computer Science and Engineering, and Biological Structure. From 2005 to 2010 he served as IT Security Director for the University of Washington School of Medicine and its major teaching hospitals. He has been a member of the American Medical Informatics Association since 1990, and an elected Fellow of the American College of Medical Informatics since 2011. His research interests include simulation systems for design of radiation treatment for cancer, software development methodology, and artificial intelligence applications to medicine, particularly expert systems, ontologies and modeling. Develops principles and methods for representing biomedical data, using information in context and in decision making, and accessing information to assist the medical community in using data to its full potential Provides a series of principles for expressing biomedical data and ideas in a computable form to integrate biological, clinical, and public health applications Includes a discussion of user interfaces, interactive graphics, and knowledge resources and reference material on programming languages to provide medical informatics programmers with the technical tools to develop systems

Methods in Biomedical Informatics

Methods in Biomedical Informatics
Author : Indra Neil Sarkar
Publisher : Academic Press
Release Date : 2013-09-03
Category : Computers
Total pages :592
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Beginning with a survey of fundamental concepts associated with data integration, knowledge representation, and hypothesis generation from heterogeneous data sets, Methods in Biomedical Informatics provides a practical survey of methodologies used in biological, clinical, and public health contexts. These concepts provide the foundation for more advanced topics like information retrieval, natural language processing, Bayesian modeling, and learning classifier systems. The survey of topics then concludes with an exposition of essential methods associated with engineering, personalized medicine, and linking of genomic and clinical data. Within an overall context of the scientific method, Methods in Biomedical Informatics provides a practical coverage of topics that is specifically designed for: (1) domain experts seeking an understanding of biomedical informatics approaches for addressing specific methodological needs; or (2) biomedical informaticians seeking an approachable overview of methodologies that can be used in scenarios germane to biomedical research. Contributors represent leading biomedical informatics experts: individuals who have demonstrated effective use of biomedical informatics methodologies in the real-world, high-quality biomedical applications Material is presented as a balance between foundational coverage of core topics in biomedical informatics with practical "in-the-trenches" scenarios. Contains appendices that function as primers on: (1) Unix; (2) Ruby; (3) Databases; and (4) Web Services.

Evaluation Methods in Biomedical Informatics

Evaluation Methods in Biomedical Informatics
Author : Charles P. Friedman,Jeremy Wyatt
Publisher : Springer Science & Business Media
Release Date : 2005-10-20
Category : Medical
Total pages :386
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Heavily updated and revised from the successful first edition Appeals to a wide range of informatics professionals, from students to on-site medical information system administrators Includes case studies and real world system evaluations References and self-tests for feedback and motivation after each chapter Great for teaching purposes, the book is recommended for courses offered at universities such as Columbia University Precise definition and use of terms

Principle of Bioinformatics

Principle of Bioinformatics
Author : P. Shanmughavel
Publisher : Pointer Publishers
Release Date : 2005
Category :
Total pages :261
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Statistical Modelling and Machine Learning Principles for Bioinformatics Techniques, Tools, and Applications

Statistical Modelling and Machine Learning Principles for Bioinformatics Techniques, Tools, and Applications
Author : K. G. Srinivasa,G. M. Siddesh,S. R. Manisekhar
Publisher : Springer Nature
Release Date : 2020-01-30
Category : Technology & Engineering
Total pages :317
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This book discusses topics related to bioinformatics, statistics, and machine learning, presenting the latest research in various areas of bioinformatics. It also highlights the role of computing and machine learning in knowledge extraction from biological data, and how this knowledge can be applied in fields such as drug design, health supplements, gene therapy, proteomics and agriculture.

Medical Informatics

Medical Informatics
Author : Edward H. Shortliffe,Leslie E. Perreault
Publisher : Springer Science & Business Media
Release Date : 2013-11-11
Category : Medical
Total pages :856
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The practice of modern medicine requires sophisticated information technologies with which to manage patient information, plan diagnostic procedures, interpret laboratory results, and conduct research. Designed for a broad audience, this book fills the need for a high quality reference in computers and medicine, first explaining basic concepts, then illustrating them with specific systems and technologies. Medical Informatics provides both a conceptual framework and a practical inspiration for this swiftly emerging scientific discipline. The second edition covers system design and engineering, ethics of health informatics, system evaluation and technology assessment, public health and consumer use of health information, and healthcare financing.

Bioinformatics in Aquaculture

Bioinformatics in Aquaculture
Author : Zhanjiang (John) Liu
Publisher : John Wiley & Sons
Release Date : 2017-04-17
Category : Computers
Total pages :606
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Bioinformatics derives knowledge from computer analysis of biological data. In particular, genomic and transcriptomic datasets are processed, analysed and, whenever possible, associated with experimental results from various sources, to draw structural, organizational, and functional information relevant to biology. Research in bioinformatics includes method development for storage, retrieval, and analysis of the data. Bioinformatics in Aquaculture provides the most up to date reviews of next generation sequencing technologies, their applications in aquaculture, and principles and methodologies for the analysis of genomic and transcriptomic large datasets using bioinformatic methods, algorithm, and databases. The book is unique in providing guidance for the best software packages suitable for various analysis, providing detailed examples of using bioinformatic software and command lines in the context of real world experiments. This book is a vital tool for all those working in genomics, molecular biology, biochemistry and genetics related to aquaculture, and computational and biological sciences.

Biomedical Informatics

Biomedical Informatics
Author : Edward H. Shortliffe,James J. Cimino
Publisher : Springer Science & Business Media
Release Date : 2013-12-02
Category : Medical
Total pages :965
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The practice of modern medicine and biomedical research requires sophisticated information technologies with which to manage patient information, plan diagnostic procedures, interpret laboratory results, and carry out investigations. Biomedical Informatics provides both a conceptual framework and a practical inspiration for this swiftly emerging scientific discipline at the intersection of computer science, decision science, information science, cognitive science, and biomedicine. Now revised and in its third edition, this text meets the growing demand by practitioners, researchers, and students for a comprehensive introduction to key topics in the field. Authored by leaders in medical informatics and extensively tested in their courses, the chapters in this volume constitute an effective textbook for students of medical informatics and its areas of application. The book is also a useful reference work for individual readers needing to understand the role that computers can play in the provision of clinical services and the pursuit of biological questions. The volume is organized so as first to explain basic concepts and then to illustrate them with specific systems and technologies.

Bioinformatics

Bioinformatics
Author : Zhumur Ghosh,Bibekanand Mallick
Publisher : Oxford University Press, USA
Release Date : 2008-01-01
Category : Bioinformatics
Total pages :560
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Bioinformatics: Principles and Applications is a comprehensive text designed to cater to the needs of undergraduate and postgraduate students of biotechnology and bioinformatics. This book will also cater to the requirements of students pursuing short-term diploma as also DOEACC courses in bioinformatics. Beginning with the aim and scope of bioinformatics, the book discusses in detail the essentials of the subject, such as bio-algorithms, bio-databases, molecular viewers, gene annotation methods, molecular phylogeny, and bio-molecular simulations. It further discusses the applications of bioinformatics in protein modeling and computer-aided drug design. The book also presents a discussion on molecular docking, including guidelines for using AutoDock software. The usage of select bioinformatics commercial software modules is also discussed. Written in a lucid style and user-friendly manner, the book with its wide and up to date coverage will be useful to students as well as practising professionals.

Global Health Informatics

Global Health Informatics
Author : Hamish S. F. Fraser
Publisher : MIT Press
Release Date : 2017-04-21
Category : Medical
Total pages :464
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Key concepts, frameworks, examples, and lessons learned in designing and implementing health information and communication technology systems in the developing world.

Cognitive Informatics for Biomedicine

Cognitive Informatics for Biomedicine
Author : Vimla L. Patel,Thomas G. Kannampallil,David R. Kaufman
Publisher : Springer
Release Date : 2015-08-10
Category : Medical
Total pages :332
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The book reports on the current state on HCI in biomedicine and health care, focusing on the role of human factors, patient safety well as methodological underpinnings of HCI theories and its application for biomedical informatics. Theories, models and frameworks for human-computer interaction (HCI) have been recognized as key contributors for the design, development and use of computer-based systems. In the clinical domain, key themes that litter the research landscape of health information technology (HIT) are usability, decision support and clinical workflow – all of which are affected directly or indirectly by the nature of HCI. While the implications of HCI principles for the design of HIT are acknowledged, the adoption of the tools and techniques among clinicians, informatics researchers and developers of HIT are limited. There is a general consensus that HIT has not realized its potential as a tool to facilitate clinical decision-making, the coordination of care and improves patient safety. Embracing sound principles of iterative design can yield significant dividends. It can also enhance practitioner’s abilities to meet “meaningful use” requirements. The purpose of the book is two-fold: to address key gaps on the applicability of theories, models and evaluation frameworks of HCI and human factors for research in biomedical informatics. It highlights the state of the art, drawing from the current research in HCI. Second, it also serves as a graduate level textbook highlighting key topics in HCI relevant for biomedical informatics, computer science and social science students working in the healthcare domain. For instructional purposes, the book provides additional information and a set of questions for interactive class discussion for each section. The purpose of these questions is to encourage students to apply the learned concepts to real world healthcare problems.​

Anatomy Ontologies for Bioinformatics

Anatomy Ontologies for Bioinformatics
Author : Albert Burger,Duncan Davidson,Richard Baldock
Publisher : Springer Science & Business Media
Release Date : 2007-12-20
Category : Technology & Engineering
Total pages :354
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This book provides a timely and first-of-its-kind collection of papers on anatomy ontologies. It is interdisciplinary in its approach, bringing together the relevant expertise from computing and biomedical studies. The book aims to provide readers with a comprehensive understanding of the foundations of anatomical ontologies and the-state-of-the-art in terms of existing tools and applications. It also highlights challenges that remain today.

Wilson and Walker's Principles and Techniques of Biochemistry and Molecular Biology

Wilson and Walker's Principles and Techniques of Biochemistry and Molecular Biology
Author : Andreas Hofmann,Samuel Clokie
Publisher : Cambridge University Press
Release Date : 2018-03-31
Category : Medical
Total pages :962
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A major update of a best-selling textbook that introduces students to the key experimental and analytical techniques underpinning life science research.

Bioinformatics

Bioinformatics
Author : Hassan A. Sadek
Publisher : Trafford Publishing
Release Date : 2004
Category : Science
Total pages :100
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This text is a resource for academics and students who want to develop collaborative learning environments. Dr. Hassan cites recent progress in bioinformatics databases that gives a hands-on, in-depth understanding that goes beyond rote memorization. Students interested in acquiring a working knowledge of the fundamentals of bioinformatics can easily become overwhelmed by the vast abundance of information on the subject. Bioinformatics: Principles and Basic Internet Applications has been specially designed to provide a concise yet comprehensive introduction to the field of bioinformatics. This brief, practical, tightly organized text shows you how to perform the biological applications. It is the only guide you need for bioinformatics every time.

Translational Bioinformatics in Healthcare and Medicine

Translational Bioinformatics in Healthcare and Medicine
Author : Anonim
Publisher : Academic Press
Release Date : 2021-05-01
Category : Business & Economics
Total pages :250
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Translational Bioinformatics in Healthcare and Medicine offers an overview of main principles of bioinformatics, biological databases, clinical informatics, health informatics, viroinformatics and real-case applications of translational bioinformatics in healthcare. Written by experts from both technology and clinical sides, the content brings together essential knowledge to make the best of recent advancements of the field. The book discusses topics such as next generation sequence analysis, genomics in clinical care, IoT applications, blockchain technology, patient centered interoperability of EHR, health data mining, and translational bioinformatics methods for drug discovery and drug repurposing. In addition, it discusses the role of bioinformatics in cancer research and viroinformatics approaches to counter viral diseases through informatics. This is a valuable resource for bioinformaticians, clinicians, healthcare professionals, graduate students and several members of biomedical field who are interested in learning more about how bioinformatics can impact in their research and practice. Covers recent advancements in translational bioinformatics and its healthcare applications Discusses integrative and multidisciplinary approaches to U-healthcare systems development and management Bridges the gap among various knowledge domains in the field, integrating both technological and clinical knowledge into practical content